Table 1 Primers for real time PCR
From: The inflammatory and normal transcriptome of mouse bladder detrusor and mucosa
Gene | GenBank ID | 5' primer sequence | 3' primer sequence | localization |
|---|---|---|---|---|
Bcap31 | NM_009922 | AAAGAATATGACCGCCTGCTAGA | AAGCCTTTACTCCTCCTTCTTGACT | 761–847 |
Catenin | BC043108 | CCTCCCCCACCCACATCTA | ACCCACACCCCACCGAgaa | 4957–5049 |
Cnn1 | NM_009922 | AGTTGTTTGCTGCCAAGTCTGA | GGTGGAAGGCAGTTTAATGGAGT | 2081–2168 |
Dlk1 | D16847 | CTTTTTGTGGTGGAGTTTGCTCTAT | gCGTGGTAGCATGGCACACA | 1859–1950 |
eiF-4E | NM_010124 | TGTGCTTGGCTGCTGAGAGA | ACGGACAGACGGACGATGA | 1446–1531 |
Grn | X62321 | CTACCTAAAGGGTGTCTGCTGTAGA | AGGAATCTTCTTTCGCAAACACTT | 1630–1729 |
Grp58 | BC003285 | AAAACCAGAGAGGACAGAATGGATAA | TGTATTTTCAAACAGTGCAGCTAAGAA | 1627–1712 |
GSTM1 | NM_010358 | TCTCCTTCCCGCTCCCTT | GAGAATGAAGGCTGTGTGGACTT | 965–1047 |
GSTO1 | NM_010362 | GGCAAGAGCCCTCAGCAA | TGAGAAAGGAGCCAGTGAGAATACT | 826–912 |
IFIT3 | BC003804 | TGTGGTGGATTCTTGGCAGTT | CTGCCTGTGCCCCAAAGT | 1279–1366 |
LAMP2 | NM_010685 | TGGCACTGGCTTAATGCTGTT | GTGCTTTGGAGGTATCTCAATATGAA | 3132–3218 |
Mafb | AF180338 | CCATCTTGAGAAGGTAGCAGCAA | AAAGTTGGGCTTGGTGGGTT | 3731–3840 |
Mpp1 | U38196 | AGATTGCCATCCTTGACATTGA | GTAGGTGCGATGAACACAATGAA | 1301–1388 |
Pls3 | NM_145629 | CACACCCAGGCTCAAAGGA | TTGTGATAAAGATTTCCAAACAAACAA | 2816–2902 |
Prss11 | NM_019564 | AGTCAACATTTGTCCCTTCCCTTA | GGCTGCGAGGACCTTCCT | 1752–1837 |
Sirt1 | AF214646 | CCTGCATAGATCTTCACCACAaat | ACACTCTCCCCAGTAGAAGTACCATT | 3016–3108 |
Smoc2 | NM_022315 | CCACTATGGGATGAAGGTTATGA | AGAAAGTGACAGCCAGCCATACA | 2377–2465 |
SPRR2A | BC010818 | ATAGCAACACTTCCATCCTCCTTT | TGAGGAGCCATCATAAGCACAT | 379–471 |
SYN1 | NM_013680 | GTTCTAAAGTCATCGTTCGGTTCTTAA | TTCCCAGCTCTGTGATCATCAA | 3334–3424 |
TMPRSS2 | AF199362 | AATCACACCAGCCATGATCTGT | AATCAGCCACCAGATCCCATT | 1364–1473 |
Upk1a | AF262335 | GGCAACTTCATCCCCATCAA | AGCAACCCTTGGTAAACAGGTAGT | 580–652 |