Table 1 Primers for RT-PCR
From: Claudin expression during early postnatal development of the murine cochlea
Template (v: splice variant) | primers | sequences | product length | GenBank Accession Number |
|---|---|---|---|---|
18S | 18S_L | gaggttcgaagacgatcaga | 316 | X00686 |
18S_R | tcgctccaccaactaagaac | |||
Claudin-1 | cldn1L | cgactccttgctgaatctga | 390 | NM_016674 |
cldn1R | cgtggtgttgggtaagaggt | |||
Claudin-2 | cldn2L | ggtggcttctgtgaggacat | 333 | NM_016675 |
cldn2R | ctttcccttggcttcttgtg | |||
Claudin-3 | cldn3L | cgggagtgcttttcctgtt | 344 | NM_009902 |
cldn3R | tgctggtagtggtgacggta | |||
Claudin-4 | cldn4L3 | ccgcgacttctacaacccta | 326 | NM_009903 |
cldn4R3 | gtccccagcaagcagttagt | |||
Claudin-5 | cldn5L2 | gaagccgtgtgtggatgac | 307 | NM_013805 |
cldn5R2 | gccctttcaggttagcaggt | |||
Claudin-6 | cldn6L1 | ctactgaggctgggaggatg | 363 | NM_ 018777 |
cldn6R1 | ttgtgtgagcagggaagtgt | |||
Claudin-7 | cldn7L1 | caactgctgggcttttcaat | 329 | NM_ 016887 |
cldn7R1 | gccttcttcgctttgtcatc | |||
Claudin-8 | cldn8L4 | agccggaatcatcttcttca | 399 | NM_018778 |
cldn8R4 | cagtgtgggctccatttctc | |||
Claudin-9 | cldn9L2 | tactccatcccttcccgttc | 331 | NM_ 020293 |
cldn9R2 | ctgaggtccaggttccagag | |||
Claudin-10v1 | cldn10v1L2 | gggatttttcggttccattt | 378 | NM_023878 |
cldn10v1R2 | tctccttctccgccttgata | |||
Claudin-10v2 | cldn10v2L | tttttcggttccatttttgc | 375 | NM_ 021386 |
cldn10v2R | atctccttctccgccttgat | |||
Claudin-11 | cldn11L2 | gccgaaaaatggacgaact | 315 | NM_008770 |
cldn11R2 | gggcacatacaggaaaccag | |||
Claudin-12 | cldn12L3 | cagatgtgctcctgttgcat | 304 | NM_022890 |
cldn12R3 | cccgtgtaaatcgtcaggtt | |||
Claudin-13 | cldn13L2 | tcgggaaaacaggtggatac | 385 | NM_020504 |
cldn13R2 | gttgacacagagcaggatgc | |||
Claudin-14 | cldn14L3 | ctgggcttcatctcctcatc | 332 | NM_ 019500 |
cldn14R3 | aagagcacctccttccctgt | |||
Claudin-15 | cldn15L2 | aagacggcagacaagaatcg | 305 | NM_021719 |
cldn15R2 | caaagatggtgttggtggtg | |||
Claudin-16 | cldn16L1 | gcagggaccacattactcatt | 389 | NM_053241 |
cldn16R1 | taaacggcacaggaacacag | |||
Claudin-17 | cldn17L11 | ggctgaagcagtaggccaag | 314 | NM_181490 |
cldn17R11 | tgagagcaaccaaggcaaga | |||
Claudin-18 | cldn18L4 | gaacccttccccaagaagag | 355 | NM_019815 |
caagctggaaaatcgaccat | ||||
Claudin-19v1 | cldn19v1L | gaagggctgtggatgtcttg | 321 | NM_001038590 |
cldn19v1R | aggagtgctggggttgaag | |||
Claudin-19v2 | cldn19v2L2 | tgctggctacatcttgtggt | 306 | NM_153105 |
cldn19v2R2 | gacagttgaatggggttgct | |||
Claudin-20 | cldn20L2 | cagctccttgctttcatcct | 356 | NM_001101560 |
cldn20R2 | aagcagactcctccagcaaa | |||
Claudin-22 | cldn22L2 | ggcttggagagacacaggag | 342 | NM_029383 |
cldn22R2 | tttctggattggcttgcttc | |||
Claudin-23 | cldn23L2 | tactacagcgacggacagca | 320 | NM_027998 |
cldn23R2 | cagttagaggaaggcgacca |