Bartel DP: MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 2004, 116: 281-297. 10.1016/S0092-8674(04)00045-5
Article
CAS
PubMed
Google Scholar
Davidson-Moncada J, Papavasiliou FN, Tam W: MicroRNAs of the immune system: roles in inflammation and cancer. Ann N Y Acad Sci 2010, 1183: 183-194. 10.1111/j.1749-6632.2009.05121.x
Article
CAS
PubMed
PubMed Central
Google Scholar
Zhang C: MicroRNAs in vascular biology and vascular disease. J Cardiovasc Transl Res 2010, 3: 235-240. 10.1007/s12265-010-9164-z
Article
CAS
PubMed
PubMed Central
Google Scholar
Dang CV: Rethinking the Warburg effect with Myc micromanaging glutamine metabolism. Cancer Res 2010, 70: 859-862. 10.1158/0008-5472.CAN-09-3556
Article
CAS
PubMed
PubMed Central
Google Scholar
Davidsen PK, Gallagher IJ, Hartman JW, Tarnopolsky MA, Dela F, Helge JW, Timmons JA, Phillips SM: High responders to resistance exercise training demonstrate differential regulation of skeletal muscle microRNA expression. J Appl Physiol 2011, 110: 309-317. 10.1152/japplphysiol.00901.2010
Article
PubMed
Google Scholar
Baggish AL, Hale A, Weiner RB, Lewis GD, Systrom D, Wang F, Wang TJ, Chan SY: Dynamic regulation of circulating microRNA during acute exhaustive exercise and sustained aerobic exercise training. J Physiol 2011, 589: 3983-3994. 10.1113/jphysiol.2011.213363
Article
CAS
PubMed
PubMed Central
Google Scholar
Radom-Aizik S, Zaldivar F Jr, Oliver S, Galassetti P, Cooper DM: Evidence for microRNA involvement in exercise-associated neutrophil gene expression changes. J Appl Physiol 2010, 109: 252-261. 10.1152/japplphysiol.01291.2009
Article
CAS
PubMed
PubMed Central
Google Scholar
Radom-Aizik S, Zaldivar F Jr, Leu SY, Adams GR, Oliver S, Cooper DM: Effects of exercise on microRNA expression in young males peripheral blood mononuclear cells. Clin Transl Sci 2012, 5: 32-38. 10.1111/j.1752-8062.2011.00384.x
Article
PubMed
PubMed Central
Google Scholar
Fernandes T, Magalhães FC, Roque FR, Phillips MI, Oliveira EM: Exercise training prevents the microvascular rarefaction in hypertension balancing angiogenic and apoptotic factors: role of microRNAs-16, -21, and −126. Hypertension 2012, 59: 513-520. 10.1161/HYPERTENSIONAHA.111.185801
Article
CAS
PubMed
Google Scholar
Radom-Aizik S, Zaldivar FP, Haddad F, Cooper DM: Impact of brief exercise on peripheral blood NK cell gene and microRNA expression in young adults. J Appl Physiol 2013, 114: 628-636. 10.1152/japplphysiol.01341.2012
Article
CAS
PubMed
PubMed Central
Google Scholar
Uhlemann M, Möbius-Winkler S, Fikenzer S, Adam J, Redlich M, Möhlenkamp S, Hilberg T, Schuler GC, Adams V: Circulating microRNA-126 increases after different forms of endurance exercise in healthy adults. Eur J Prev Cardiol 2012. 10.1177/2047487312467902
Google Scholar
Bye A, Røsjø H, Aspenes ST, Condorelli G, Omland T, Wisløff U: Circulating MicroRNAs and Aerobic Fitness - The HUNT-Study. PLoS One 2013, 8: e57496. 10.1371/journal.pone.0057496
Article
CAS
PubMed
PubMed Central
Google Scholar
McKenzie S, Phillips SM, Carter SL, Lowther S, Gibala MJ, Tarnopolsky MA: Endurance exercise training attenuates leucine oxidation and BCOAD activation during exercise in humans. Am J Physiol Endocrinol Metab 2000, 278: E580-587.
CAS
PubMed
Google Scholar
Huang CC, Lin WT, Hsu FL, Tsai PW, Hou CC: Metabolomics investigation of exercise-modulated changes in metabolism in rat liver after exhaustive and endurance exercises. Eur J Appl Physiol 2010, 108: 557-566. 10.1007/s00421-009-1247-7
Article
CAS
PubMed
Google Scholar
Ribas GS, Sitta A, Wajner M, Vargas CR: Oxidative stress in phenylketonuria: what is the evidence? Cell Mol Neurobiol 2011, 31: 653-662. 10.1007/s10571-011-9693-2
Article
CAS
PubMed
Google Scholar
Mashima R, Nakanishi-Ueda T, Yamamoto Y: Simultaneous determination of methionine sulfoxide and methionine in blood plasma using gas chromatography–mass spectrometry. Anal Biochem 2003, 313: 28-33. 10.1016/S0003-2697(02)00537-7
Article
CAS
PubMed
Google Scholar
Gibala MJ: Protein metabolism and endurance exercise. Sports Med 2007, 37: 337-340. 10.2165/00007256-200737040-00016
Article
PubMed
Google Scholar
Horn P, Kalz A, Lim CL, Pyne D, Saunders P, Mackinnon L, Peake J, Suzuki K: Exercise-recruited NK cells display exercise-associated eHSP-70. Exerc Immunol Rev 2007, 13: 100-111.
PubMed
Google Scholar
Feezor RJ, Baker HV, Mindrinos M, Hayden D, Tannahill CL, Brownstein BH, Fay A, MacMillan S, Laramie J, Xiao W, Moldawer LL, Cobb JP, Laudanski K, Miller-Graziano CL, Maier RV, Schoenfeld D, Davis RW, Tompkins RG, Inflammation and Host Response to Injury, Large-Scale Collaborative Research Program: Whole blood and leukocyte RNA isolation for gene expression analyses. Physiol Genomics 2004, 19: 247-254. 10.1152/physiolgenomics.00020.2004
Article
CAS
PubMed
Google Scholar
Broderick JA, Salomon WE, Ryder SP, Aronin N, Zamore PD: Argonaute protein identity and pairing geometry determine cooperativity in mammalian RNA silencing. RNA 2011, 17: 1858-1869. 10.1261/rna.2778911
Article
CAS
PubMed
PubMed Central
Google Scholar
Takimoto K, Wakiyama M, Yokoyama S: Mammalian GW182 contains multiple Argonaute-binding sites and functions in microRNA-mediated translational repression. RNA 2009, 15: 1078-1089. 10.1261/rna.1363109
Article
CAS
PubMed
PubMed Central
Google Scholar
Davidson ME, Kerepesi LA, Soto A, Chan VT: D-Serine exposure resulted in gene expression changes implicated in neurodegenerative disorders and neuronal dysfunction in male Fischer 344 rats. Arch Toxicol 2009, 83: 747-762. 10.1007/s00204-009-0405-3
Article
CAS
PubMed
Google Scholar
Jin Z, May WS, Gao F, Flagg T, Deng X: Bcl2 suppresses DNA repair by enhancing c-Myc transcriptional activity. J Biol Chem 2006, 281: 14446-14456. 10.1074/jbc.M511914200
Article
CAS
PubMed
Google Scholar
Chen Y, Olopade OI: MYC in breast tumor progression. Expert Rev Anticancer Ther 2008, 8: 1689-1698. 10.1586/14737140.8.10.1689
Article
CAS
PubMed
PubMed Central
Google Scholar
Tonic I, Yu WN, Park Y, Chen CC, Hay N: Akt activation emulates Chk1 inhibition and Bcl2 overexpression and abrogates G2 cell cycle checkpoint by inhibiting BRCA1 foci. J Biol Chem 2010, 285: 23790-23798. 10.1074/jbc.M110.104372
Article
CAS
PubMed
PubMed Central
Google Scholar
De Siervi A, De Luca P, Byun JS, Di LJ, Fufa T, Haggerty CM, Vazquez E, Moiola C, Longo DL, Gardner K: Transcriptional autoregulation by BRCA1. Cancer Res 2010, 70: 532-542. 10.1158/0008-5472.CAN-09-1477
Article
CAS
PubMed
PubMed Central
Google Scholar
Rhoades MW, Reinhart BJ, Lim LP, Burge CB, Bartel B, Bartel DP: Prediction of plant microRNA targets. Cell 2002, 110: 513-520. 10.1016/S0092-8674(02)00863-2
Article
CAS
PubMed
Google Scholar
Lewis BP, Burge CB, Bartel DP: Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 2005, 120: 15-20. 10.1016/j.cell.2004.12.035
Article
CAS
PubMed
Google Scholar
Thum T, Gross C, Fiedler J, Fischer T, Kissler S, Bussen M, Galuppo P, Just S, Rottbauer W, Frantz S, Castoldi M, Soutschek J, Koteliansky V, Rosenwald A, Basson MA, Licht JD, Pena JT, Rouhanifard SH, Muckenthaler MU, Tuschl T, Martin GR, Bauersachs J, Engelhardt S: MicroRNA-21 contributes to myocardial disease by stimulating MAP kinase signalling in fibroblasts. Nature 2008, 456: 980-984. 10.1038/nature07511
Article
CAS
PubMed
Google Scholar
Godwin JG, Ge X, Stephan K, Jurisch A, Tullius SG, Iacomini J: Identification of a microRNA signature of renal ischemia reperfusion injury. Proc Natl Acad Sci USA 2010, 107: 14339-14344. 10.1073/pnas.0912701107
Article
CAS
PubMed
PubMed Central
Google Scholar
O’Neill LA, Sheedy FJ, McCoy CE: MicroRNAs: the fine-tuners of Toll-like receptor signalling. Nat Rev Immunol 2011, 11: 163-175. 10.1038/nri2957
Article
PubMed
Google Scholar
Ashokkumar C, Ningappa M, Ranganathan S, Higgs BW, Sun Q, Schmitt L, Snyder S, Dobberstein J, Branca M, Jaffe R, Zeevi A, Squires R, Alissa F, Shneider B, Soltys K, Bond G, Abu-Elmagd K, Humar A, Mazariegos G, Hakonarson H, Sindhi R: Increased expression of peripheral blood leukocyte genes implicate CD14+ tissue macrophages in cellular intestine allograft rejection. Am J Pathol 2011, 179: 1929-1938. 10.1016/j.ajpath.2011.06.040
Article
CAS
PubMed
PubMed Central
Google Scholar
Gabriely G, Wurdinger T, Kesari S, Esau CC, Burchard J, Linsley PS, Krichevsky AM: MicroRNA 21 promotes glioma invasion by targeting matrix metalloproteinase regulators. Mol Cell Biol 2008, 28: 5369-5380. 10.1128/MCB.00479-08
Article
CAS
PubMed
PubMed Central
Google Scholar
Wang Z, Ahmad A, Li Y, Kong D, Azmi AS, Banerjee S, Sarkar FH: Emerging roles of PDGF-D signaling pathway in tumor development and progression. Biochim Biophys Acta 1806, 2010: 122-130.
Google Scholar
Hafner M, Landthaler M, Burger L, Khorshid M, Hausser J, Berninger P, Rothballer A, Ascano M Jr, Jungkamp AC, Munschauer M, Ulrich A, Wardle GS, Dewell S, Zavolan M, Tuschl T: Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. Cell 2010, 141: 129-141. 10.1016/j.cell.2010.03.009
Article
CAS
PubMed
PubMed Central
Google Scholar
Saito J, Toriumi S, Awano K, Ichijo H, Sasaki K, Kobayashi T, Tamura S: Regulation of apoptosis signal-regulating kinase 1 by protein phosphatase 2Cepsilon. Biochem J 2007, 405: 591-596. 10.1042/BJ20070231
Article
CAS
PubMed
PubMed Central
Google Scholar
Espinosa EJ, Calero M, Sridevi K, Pfeffer SR: RhoBTB3: a Rho GTPase-family ATPase required for endosome to Golgi transport. Cell 2009, 137: 938-948. 10.1016/j.cell.2009.03.043
Article
CAS
PubMed
PubMed Central
Google Scholar
Kurian SM, Le-Niculescu H, Patel SD, Bertram D, Davis J, Dike C, Yehyawi N, Lysaker P, Dustin J, Caligiuri M, Lohr J, Lahiri DK, Nurnberger JI Jr, Faraone SV, Geyer MA, Tsuang MT, Schork NJ, Salomon DR, Niculescu AB: Identification of blood biomarkers for psychosis using convergent functional genomics. Mol Psychiatry 2011, 16: 37-58. 10.1038/mp.2009.117
Article
CAS
PubMed
Google Scholar
Zhu H, Fan GC: Role of microRNAs in the reperfused myocardium towards post-infarct remodelling. Cardiovasc Res 2012, 94: 284-292. 10.1093/cvr/cvr291
Article
CAS
PubMed
PubMed Central
Google Scholar
Lal A, Navarro F, Maher CA, Maliszewski LE, Yan N, O’Day E, Chowdhury D, Dykxhoorn DM, Tsai P, Hofmann O, Becker KG, Gorospe M, Hide W, Lieberman J: miR-24 Inhibits cell proliferation by targeting E2F2, MYC, and other cell-cycle genes via binding to “seedless” 3‘UTR microRNA recognition elements. Mol Cell 2009, 35: 610-625. 10.1016/j.molcel.2009.08.020
Article
CAS
PubMed
PubMed Central
Google Scholar
Burge JA, Hanna MG: Novel insights into the pathomechanisms of skeletal muscle channelopathies. Curr Neurol Neurosci Rep 2012, 12: 62-69. 10.1007/s11910-011-0238-3
Article
CAS
PubMed
Google Scholar
Gui YX, Wan Y, Xiao Q, Wang Y, Wang G, Chen SD: Verification of expressions of Kir2 as potential peripheral biomarkers in lymphocytes from patients with Parkinson’s disease. Neurosci Lett 2011, 505: 104-108. 10.1016/j.neulet.2011.09.070
Article
CAS
PubMed
Google Scholar
Huang Z, Chen X, Yu B, He J, Chen D: MicroRNA-27a promotes myoblast proliferation by targeting myostatin. Biochem Biophys Res Commun 2012, 423: 265-269. 10.1016/j.bbrc.2012.05.106
Article
CAS
PubMed
Google Scholar
Yang WH, Nussbaum C, Grewal PK, Marth JD, Sperandio M: Coordinated roles of ST3Gal-VI and ST3Gal-IV sialyltransferases in the synthesis of selectin ligands. Blood 2012, 120: 1015-1026. 10.1182/blood-2012-04-424366
Article
CAS
PubMed
PubMed Central
Google Scholar
Chen CZ, Li L, Lodish HF, Bartel DP: MicroRNAs modulate hematopoietic lineage differentiation. Science 2004, 303: 83-86. 10.1126/science.1091903
Article
CAS
PubMed
Google Scholar
Li QJ, Chau J, Ebert PJ, Sylvester G, Min H, Liu G, Braich R, Manoharan M, Soutschek J, Skare P, Klein LO, Davis MM, Chen CZ: miR-181a is an intrinsic modulator of T cell sensitivity and selection. Cell 2007, 129: 147-161. 10.1016/j.cell.2007.03.008
Article
CAS
PubMed
Google Scholar
Chen L, Kass RS: A-kinase anchoring proteins: different partners, different dance. Nat Cell Biol 2005, 7: 1050-1051.
Article
CAS
PubMed
Google Scholar
Bartoloni L, Antonarakis SE: The human sugar-phosphate/phosphate exchanger family SLC37. Pflugers Arch 2004, 447: 780-783. 10.1007/s00424-003-1105-0
Article
CAS
PubMed
Google Scholar
Cooper DM, Weiler-Ravell D, Whipp BJ, Wasserman K: Aerobic parameters of exercise as a function of body size during growth in children. J Appl Physiol 1984, 56: 628-634.
CAS
PubMed
Google Scholar
Beaver WL, Wasserman K, Whipp BJ: A new method for detecting anaerobic threshold by gas exchange. J Appl Physiol 1986, 60: 2020-2027.
CAS
PubMed
Google Scholar
Floegel A, Stefan N, Yu Z, Mühlenbruch K, Drogan D, Joost HG, Fritsche A, Häring HU, Hrabe de Angelis M, Peters A, Roden M, Prehn C, Wang-Sattler R, Illig T, Schulze MB, Adamski J, Boeing H, Pischon T: Identification of serum metabolites associated with risk of type 2 diabetes using a targeted metabolomic approach. Diabetes 2013, 62: 639-648. 10.2337/db12-0495
Article
CAS
PubMed
PubMed Central
Google Scholar
Sakharov DA, Maltseva DV, Riabenko EA, Shkurnikov MU, Northoff H, Tonevitsky AG, Grigoriev AI: Passing the anaerobic threshold is associated with substantial changes in the gene expression profile in white blood cells. Eur J Appl Physiol 2012, 112: 963-972. 10.1007/s00421-011-2048-3
Article
CAS
PubMed
Google Scholar
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JY, Zhang J: Bioconductor: open software development for computational biology and bioinformatics. Genome Biol 2004, 5: R80. 10.1186/gb-2004-5-10-r80
Article
PubMed
PubMed Central
Google Scholar
Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP: Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 2003, 4: 249-264. 10.1093/biostatistics/4.2.249
Article
PubMed
Google Scholar
Bolstad BM, Irizarry RA, Astrand M, Speed TP: A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 2003, 19: 185-193. 10.1093/bioinformatics/19.2.185
Article
CAS
PubMed
Google Scholar
Tukey JW: Exploratory data analysis. Reading: Addison-Wesley; 1977.
Google Scholar
Smyth GK: Limma: linear models for microarray data. In Bioinformatics and computational biology solutions using R and bioconductor. Edited by: Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W. New York: Springer; 2005:397-420.
Chapter
Google Scholar
Yang YH, Speed TP: Design and analysis of comparative microarray experiments. In: Statistical analysis of gene expression microarray data. Edited by Speed TP. Chapman and Hall/CRC Press; 2003:35-93.
Google Scholar
Benjamini Y, Hochberg Y: Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Statist Soc B (Methodological) 1995, 57: 289-300.
Google Scholar
da Huang W, Sherman BT, Lempicki RA: Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 2009, 4: 44-57.
Article
PubMed
Google Scholar